Carolina
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    Mapping and variant calling (short reads) Population SV calling Population mapping Nanopore assembly and var calling Population variant calling Whole genome alignment
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    In this page you can find a collection of articles and other work that has featured my code or pipelines. Links are in no particular order.

    • https://academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad051/7227510 - not specified in the article, but some of the code used has been shared in my GitHub.

    • How do users design scientific workflows? The Case of Snakemake

    • Long-read de novo assembly of the red-legged partridge (Alectoris rufa) genome

    • Identification and characterisation of de novo germline structural variants in two commercial pig lines using trio-based whole genome sequencing

    • Detection and characterisation of de novo structural variants in pigs

    • Landscape genomics reveals regions associated with adaptive phenotypic and genetic variation in Ethiopian indigenous chickens

    • GitHub
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    Carolina Pita Barros  •  2024

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